Dear Bruce,

Many thanks for your answer.

All the best,

Mohamed

On 11/01/16 14:40, Bruce Fischl wrote:

Hi Mohamed

you can use mri_synthesize to create a flash image with good T1 contrast from quantitative maps and run it through recon-all.

cheers Bruce On Mon, 11 Jan 2016, Mohamed Ali Bahri wrote:

...

Dear Freesurfer Experts,

I am wondering if the cortical reconstruction is possible for the quantitative mri images (R1, MT, PD...) obtained with the multiparameter sequences . If yes which image should i use?

Many thanks in advance,

Mohamed

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