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Hi Freesurfer team,
I am transforming several adjacent surface labels into volume ROIs, using *mri_label2vol*. When doing so, there seems to be some possibly unavoidable overlap in a small number of voxels in the volume ROIs. Is there any way to avoid these labels from overlapping when transformed into the volume? I see that *mri_label2vol* takes an --annot flag, would this help in avoiding overlap in the outputs?
Otherwise, I can remove the overlapping voxels int he nifti file outputs, but I was wondering if the algorithm had any options to do this as part of the surface-to-volume transform.
Thanks so much! Jacob
freesurfer@nmr.mgh.harvard.edu