External Email - Use Caution
Hi guys,
I need to extract the eTIV from a stats file
Its like this:
# Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1667606.252292, mm^3
According to https://secure-web.cisco.com/176-9WTUemMQHEI2hQhkubecmphcM6MFO1hfMQO3SLSaZ4X..., typing
mri_segstats --subject subjid --etiv-only
Doesn't work for FS7.1.1. Also the --etiv flag in mri_segstats doesn't seem to work either. And the --etiv flag in asegstats2table. I also tried figuring how its done in recon-all.log but just need the eTIV and no other stats. Whats the best FS command to do this in FS7.1.1?
Victor Zeng Beth Israel Deaconess Medical Center PI: Keshavan, Lizano, Bolo
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When you say that it doesn't work, what do you mean? I was able to run your command line successfully in 7.1.1
On 12/18/2024 7:34 PM, Zeng, Victor (BIDMC - Keshavan - Psychiatry) wrote:
External Email - Use Caution
Hi guys,
I need to extract the eTIV from a stats file
Its like this:
# Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1667606.252292, mm^3
According to *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://surfer.nmr.mgh.harvard.edu/fswiki/eTIV https://secure-web.cisco.com/176-9WTUemMQHEI2hQhkubecmphcM6MFO1hfMQO3SLSaZ4XgbPLx_gzF8eZKMrKq1QjkP0swmFHDdr6gbzW4HJEgq9-r54RmCom3ITrxDZjSK65MlrZl_IjHbRDgF7ieIT5JadKLL00AECevo_bSql-LRiWxamVjTfElCpWBW83EJRRDe37NEst38VTJhHllNwhENzfwVdh16Lk5S6Fgc6FWYT0VO_YpzZ6xCo360FfzsiI_jzRtPsXxyTc5WpdgqCoymx___4liGlpTTZak8tJfUuuuGS8la0cwO-tZVv2bJdcBp3GrvkWKBQ0vAZMWH/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FeTIV, typing mri_segstats --subject subjid --etiv-only
Doesn't work for FS7.1.1. Also the --etiv flag in mri_segstats doesn't seem to work either. And the --etiv flag in asegstats2table. I also tried figuring how its done in recon-all.log but just need the eTIV and no other stats. Whats the best FS command to do this in FS7.1.1?
Victor Zeng Beth Israel Deaconess Medical Center PI: Keshavan, Lizano, Bolo
--
PLEASE NOTE: This message is intended for the use of the person to whom it is addressed. It may contain information that is privileged, confidential and exempt from disclosure under applicable law. If you are not the intended recipient, your use of this message for any purpose is strictly prohibited. If you have received this communication in error, please delete the message and notify the sender so that we may correct our records. See our web page at http://www.bilh.org for a full directory of Beth Israel Lahey Health sites, staff, services and career opportunities.
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Zeng, Victor (BIDMC - Keshavan - Psychiatry)