External Email - Use Caution
Hello FreeSurfer Developers,
I'm attempting to run FreeSurfer but I get the following error when I run the recon-all command:
ERROR reading /panfs/pan.fsl.byu.edu/scr/usr/74/intj5/analyses/ACAP-BRAVOS/freesurfer/fsaverage/label/lh.BA1_exvivo.label http://pan.fsl.byu.edu/scr/usr/74/intj5/analyses/ACAP-BRAVOS/freesurfer/fsaverage/label/lh.BA1_exvivo.label
I've searched the list and no similar errors have been reported. Does anyone have any thoughts on how to trouble-shoot this one? Also, Ive attached the recon-all.log in case it's of any use.
1) FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c 2) Platform: Red Hat Enterprise Linux Server release 6.6 (Santiago) 3) uname -a: Linux m8-8-5 2.6.32-696.18.7.el6.x86_64 #1 SMP Thu Dec 28 20:15:47 EST 2017 x86_64 x86_64 x86_64 GNU/Linux 4) recon-all.log: see attached
Thanks,
Naomi
Naomi J. Goodrich-Hunsaker, Ph.D. Research Associate University of Utah e. naomi.hunsaker@utah.edu mailto:naomi.hunsaker@utah.edu w. http://biabl.github.io https://esig.ly/links/255317 Follow me: https://esig.ly/links/255318 https://esig.ly/links/255319 https://esig.ly/links/255320 https://esig.ly/links/255321 https://esig.ly/links/255322 https://esig.ly/links/255323 https://esig.ly/links/255324
Does this file exist?
/panfs/pan.fsl.byu.edu/scr/usr/74/intj5/analyses/ACAP-BRAVOS/freesurfer/fsaverage/label/lh.BA1_exvivo.label
If not, can you send a listing of that folder?
On 5/19/18 9:06 PM, Naomi Hunsaker wrote:
Hello FreeSurfer Developers,
I'm attempting to run FreeSurfer but I get the following error when I run the recon-all command:
ERROR reading
/panfs/pan.fsl.byu.edu/scr/usr/74/intj5/analyses/ACAP-BRAVOS/freesurfer/fsaverage/label/lh.BA1_exvivo.label http://pan.fsl.byu.edu/scr/usr/74/intj5/analyses/ACAP-BRAVOS/freesurfer/fsaverage/label/lh.BA1_exvivo.label
I've searched the list and no similar errors have been reported. Does anyone have any thoughts on how to trouble-shoot this one? Also, Ive attached the recon-all.log in case it's of any use.
- FreeSurfer version:
freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c 2) Platform: Red Hat Enterprise Linux Server release 6.6 (Santiago) 3) uname -a: Linux m8-8-5 2.6.32-696.18.7.el6.x86_64 #1 SMP Thu Dec 28 20:15:47 EST 2017 x86_64 x86_64 x86_64 GNU/Linux 4) recon-all.log: see attached
Thanks,
Naomi
Naomi J. Goodrich-Hunsaker, Ph.D.
Research Associate
University of Utah
e. naomi.hunsaker@utah.edu mailto:naomi.hunsaker@utah.edu
w. http://biabl.github.io https://esig.ly/links/255317
Follow me: https://esig.ly/links/255318 https://esig.ly/links/255319 https://esig.ly/links/255320 https://esig.ly/links/255321 https://esig.ly/links/255322 https://esig.ly/links/255323 https://esig.ly/links/255324
freesurfer@nmr.mgh.harvard.edu