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Hello, experts
I have a problem with the results of mris_make_surfaces to pial and white matter surfaces. I am working with high resolution (0.75x0.75x0.75) monkey images, mris_makes_surfaces finish without errors but the surfaces have notches, I attach an image as an example of the error.
This is the line that I am using mris_make_surfaces -whiteonly -noaparc -noaseg -mgz -T1 brain.finalsurfs subject lh.
The error only appers with mris_make_surfaces, the segmentation of wm and ?h.orig looks good.
Thanks a lot Pam [image: Screenshot from 2018-05-18 14:29:12.png]
What is the actual problem? That the surface is a little rough?
On 5/18/18 3:47 PM, Pam Garcia wrote:
Hello, experts
I have a problem with the results of mris_make_surfaces to pial and white matter surfaces. I am working with high resolution (0.75x0.75x0.75) monkey images, mris_makes_surfaces finish without errors but the surfaces have notches, I attach an image as an example of the error.
This is the line that I am using mris_make_surfaces -whiteonly -noaparc -noaseg -mgz -T1 brain.finalsurfs subject lh.
The error only appers with mris_make_surfaces, the segmentation of wm and ?h.orig looks good.
Thanks a lot Pam Screenshot from 2018-05-18 14:29:12.png
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