Yes, see fcseedcor -help

On 11/11/18 4:40 AM, Maedeh Khalilian wrote:

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Dear FreeSurfer experts, I have a general question, if i have a parcellation(an annotation file e.g aparc.annot which is the output of FreeSurfer) is FreeSurfer able to calculate the functional connectivity between the regions(parcels) using rs-fMRI data? I mean can I have a 68*68 matrix showing the functional connectivity between each pair of regions(parcels) at the end? I would be grateful if u could help me. best regards, Maedeh

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