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Hi Douglas,

I would going from freesurfer 6 to freesurfer 5.3, not from FS 5.3 to FS 6.

Best,

El vie., 12 nov. 2021 15:51, Douglas N. Greve dgreve@mgh.harvard.edu escribió:

If you are going from 5.3 to 6, you should just be able to run recon-all -all on the 5.3 folder and it should take into account your previous edits (make a copy first though:)

On 11/12/2021 4:40 AM, Steve Petersen wrote:

    External Email - Use Caution

Dear all,

We conducted the recon-all and applied a quality control protocol in several subjects using the FSurfer 6 version. Now, we would like to run the recon-all again on an older version of FSurfer (5.3 v) but considering the edits we made on those previous recon-all. Is this possible?, and if so, what would be the command?

Thank you very much in advance.

Best regards,

Steve.

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Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1WPi6-EmssmI2iLG15xmYyxeYhSGoyNTDf4oPy_Qx9k1Tb0... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at http://secure-web.cisco.com/1fWn93lUWOA0uXuAi-LRAomJY4zMi6OfnzcFLbgFB0QFT47e... . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.

Oh, I think that should work, but no promises. Just re-run the v6 output in 5.3. Why are you going back to 5.3?

On 11/12/2021 10:45 AM, Miguel Ángel Rivas Fernández wrote:

External Email - Use Caution

Hi Douglas,

I would going from freesurfer 6 to freesurfer 5.3, not from FS 5.3 to FS 6.

Best,

El vie., 12 nov. 2021 15:51, Douglas N. Greve dgreve@mgh.harvard.edu escribió:

If you are going from 5.3 to 6, you should just be able to run
recon-all -all on the 5.3 folder and it should take into account
your previous edits (make a copy first though:)

On 11/12/2021 4:40 AM, Steve Petersen wrote:

...

        External Email - Use Caution

Dear all,

We conducted the recon-all and applied a quality control protocol
in several subjects using the FSurfer 6 version. Now, we would
like to run the recon-all again on an older version of FSurfer
(5.3 v) but considering the edits we made on those previous
recon-all. Is this possible?, and if so, what would be the command?

Thank you very much in advance.

Best regards,

Steve.

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