Dear experts,
I would like to move my aparc+aseg.mgz image back to the native T1 space (rawavg.mgz). I tried: mri_convert -rl rawavg.mgz -rt nearest aparc+aseg.mgz ./subj001_aparc+aseg2raw.nii.gz
However, it there a way that I don't change the value within the original aparc+aseg.mgz, so that I can use the LUT to define ROIs for additional processes?
Thanks.
Monica
Hi Monica
I'm not sure what that means, but adding segmentation labels requires manual labeling and retraining etc....
cheers Bruce On Mon, 17 Oct 2011, Hsiao-Ying (Monica) Wey wrote:
Dear experts,
I would like to move my aparc+aseg.mgz image back to the native T1 space (rawavg.mgz). I tried: mri_convert -rl rawavg.mgz -rt nearest aparc+aseg.mgz ./subj001_aparc+aseg2raw.nii.gz
However, it there a way that I don't change the value within the original aparc+aseg.mgz, so that I can use the LUT to define ROIs for additional processes?
Thanks.
Monica
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
See http://www.freesurfer.net/fswiki/FsAnat-to-NativeAnat doug
Hsiao-Ying (Monica) Wey wrote:
Dear experts,
I would like to move my aparc+aseg.mgz image back to the native T1 space (rawavg.mgz). I tried: mri_convert -rl rawavg.mgz -rt nearest aparc+aseg.mgz ./subj001_aparc+aseg2raw.nii.gz
However, it there a way that I don't change the value within the original aparc+aseg.mgz, so that I can use the LUT to define ROIs for additional processes?
Thanks.
Monica
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu