Thank you for the quick answer. I am trying to know how to use tkregister2, but I would like to know why the latest tkregister suddenly doesn't work.

Sungeun.

Doug Greve wrote:

Did you mean to use tkregister2? tkregister has not been used in years (we should actually remove it from the dist).

doug

Sungeun Kim wrote:

...

Hi,

I experienced one problem with tkregister. I tried to register local low-res. anatomical data to high-res anatomical data using tkregister. So, I did

tkregister -mkdefault

modified some parameters. This was OK, but when I did

tkregister local

I got the segmentation fault message like:

tkregister: starting register register: cwd scan => subject's T1/COR's register: reg image transform matrix: -0.999945 0.000000 0.010472 0.207543 0.010406 -0.111469 0.993713 -22.441641 0.001167 0.993768 0.111463 12.550290 0.000000 0.000000 0.000000 1.000000 register: done reading target COR images register: input file type: bshort (x,y,t: <prefix><z>.bshort) Segmentation fault

I am using the latest stable version from the web site and I didn't have this problem with the previous version. I tested with another data which worked good with the previous version. But, I still have the same problem.

Is there any solution or suggestion to this problem?

Thank you in advance.

Sungeun Kim. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Yes, I have been using tkregister and I am not familiar with tkregister2.

Doug Greve wrote:

tkregister2 is the latest. Have you been using tkregister?

Sungeun Kim wrote:

...

Thank you for the quick answer. I am trying to know how to use tkregister2, but I would like to know why the latest tkregister suddenly doesn't work.

Sungeun.

Doug Greve wrote:

...

Did you mean to use tkregister2? tkregister has not been used in years (we should actually remove it from the dist).

doug

Sungeun Kim wrote:

...

Hi,

I experienced one problem with tkregister. I tried to register local low-res. anatomical data to high-res anatomical data using tkregister. So, I did

tkregister -mkdefault

modified some parameters. This was OK, but when I did

tkregister local

I got the segmentation fault message like:

tkregister: starting register register: cwd scan => subject's T1/COR's register: reg image transform matrix: -0.999945 0.000000 0.010472 0.207543 0.010406 -0.111469 0.993713 -22.441641 0.001167 0.993768 0.111463 12.550290 0.000000 0.000000 0.000000 1.000000 register: done reading target COR images register: input file type: bshort (x,y,t: <prefix><z>.bshort) Segmentation fault

I am using the latest stable version from the web site and I didn't have this problem with the previous version. I tested with another data which worked good with the previous version. But, I still have the same problem.

Is there any solution or suggestion to this problem?

Thank you in advance.

Sungeun Kim. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer