External Email - Use Caution
Dear List, I have installed the ubuntu version of freesurfer (creating the VM as in the tutorial) I would like to run the following command:
mri_convert -c -oc 0 0 0 asta.mgh orig.mgz
I always get the error in the screen shot. Can someone help me? also using asta.nii format
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Ing. Pierpaolo Croce, PhD. Institute for Advanced Biomedical Technologies - ITAB and Department of Neuroscience and Imaging University of Chieti "G. D'Annunzio" Via dei Vestini, 33 66013 Chieti, Italy
Have you made sure that you have read permission to open those files? What is the output of `ls -l asta.mgh`? And asta.nii doesn’t seem to be a file in your working directory.
Best, Andrew
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Pierpaolo Croce pierpaolo12croce@gmail.com Date: Thursday, April 8, 2021 at 11:32 AM To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] mri_convert problem
External Email - Use Caution Dear List, I have installed the ubuntu version of freesurfer (creating the VM as in the tutorial) I would like to run the following command:
mri_convert -c -oc 0 0 0 asta.mgh orig.mgz
I always get the error in the screen shot. Can someone help me? also using asta.nii format --
Ing. Pierpaolo Croce, PhD. Institute for Advanced Biomedical Technologies - ITAB and Department of Neuroscience and Imaging University of Chieti "G. D'Annunzio" Via dei Vestini, 33 66013 Chieti, Italy
freesurfer@nmr.mgh.harvard.edu
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Hoopes, Andrew -
Pierpaolo Croce