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Dear Wu, The “templates” are probabilistic atlases with no image intensities. All you can look at is images like the ones in the top panel of Figure 5 in the paper. If you want to generate these, let me know and I’ll show you instructions (it’s a bit tricky, because it requires combining different versions of FreeSurfer….) Cheers, /Eugenio

-- Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com

From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Dongsheng Wu dswuscu@163.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Tuesday, 30 April 2019 at 04:38 To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Hippocampal subfields segmentation template

External Email - Use Caution Dear FS developers,

I uesd the ''recon-all command'' to get the volumes of the hippocampal subfields, and we would like to perform further analysis with these subfields in MNI. Could you show us the templates which are used to perform hippocampal segmentation (CA1, CA3, HATA, etc.)?

Best wishes, Wu