External Email - Use Caution
Great, thanks so much! But I am having difficulty understanding how to construct the contrast to answer the following question "Is the interaction between group (CU/CI) and cortisol significant regressing out the effect of sex, age, APOE_carrier, abeta and ptau?" It seems like the contrast would be the same as before.. Can you help me with this?
Thanks again!
Laura Willers de Souza
PhD Student in Pharmacology and Therapeutics
Zimmer Lab - Federal University of Rio Grande do Sul
- Porto Alegre/RS - Brazil
-----
Douglas N. Grevehttps://secure-web.cisco.com/1yYgRLzmOCtuh8UFLaxt4ucohab6Ii9cqIDNXc9_tUgQITTp1lOWVlAhzXYGkoInMWkZJnqBum7Q2bchzciGSB2Na5ppT64MdUHXfn7DI7OxVbl4tT_fQgG0kh4IlbeSX880ZgCJICom9qj1NBstIOI_qjcTChjXuR3dPdszFYItn-gVUJfGCKXlG9o7fhLWguzZ50_ydhnvD4rOrLoYLiBMx5Nmfxu8b5Qmskd6WJN4ex-Jbo86HQs-OZhybUtFxJTLMjaMs7VA2KehPsIkWC3mSNsPAK9OmfLQGqixmeiXleO-ZWJPtFvWKnaHcn4WLC4dwagoumvUqRgC7u1xm6-Cyydvyaps-m9D_aFSH-mc/https%3A%2F%2Fwww.mail-archive.com%2Fsearch%3Fl%3Dfreesurfer%40nmr.mgh.harvard.edu%26q%3Dfrom%3A%2522Douglas%2BN.%2BGreve%2522 Wed, 15 Nov 2023 06:54:36 -0800https://secure-web.cisco.com/1YP7c0yUfORmuLGAmHVodnKa9al2_Y0u_TMgwZ8HHpNLBopCps66WL5fi8BIQOtGT2EIe686Cb-kKvvGhRCe4_SaK0WJ3KOn4c9Sj2WdQqojkvfBeHT3N0kEtpp4XZYzhlfT_eJ5jkScsByN1WqEs3tHZcGwdZjDYiA2VHhgtKgDSnuHH09-N9wy-MRx6r58e_5aLN4OM9T2RKO6OnJ5mx8nK9pUHOSr26E4tD08yymXHHwjtsv4xTNRM0PO-47K6TZb26i11we8tVt1lnats3dUctrHhexXc9YvBQKMu_pUzZw2Ma-p89k7jGVEZBbCbg5alwGGg9GzThW3Fv1_YxTcKTYDjh20IrtgY3QjPvlU/https%3A%2F%2Fwww.mail-archive.com%2Fsearch%3Fl%3Dfreesurfer%40nmr.mgh.harvard.edu%26q%3Ddate%3A20231115
Yes, that looks right (assuming that cortisol is your first variable)
---- On 11/7/2023 3:49 PM, Laura Willers de Souza wrote:
External Email - Use Caution
Hello FreeSurfer Developers,
Following the FSGD examples on the website, I built the following test:
Question: Is there an association between cortisol and cortical thickness regressing out the effect of sex, age, APOE4_carrier (1=1 or 2 alleles, 0=no alleles), abeta, ptau, diagnosis (CU and CI)? Regressors: 2 factors (sex, diagnosis) with 2 levels each, 5 covariates (age, APOE4_carrier (1=1 or 2 alleles, 0=no alleles), abeta, ptau, cortisol) >> 24 regressors
Contrast: 0 0 0 0 0.5 -0.5 0.5 -0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FSGD: GroupDescriptorFile 1 Title CSF_semgrupos Class MaleCU Class MaleCI Class FemaleCU Class FemaleCI Variables Cortisol Age ABETA ptau APOE4_carrier Input 098_S_4003_I224603 MaleCI 11 81.3 741.5 22.83 1
Does this feel right to you?
I am having difficulty understanding how to construct the contrast to answer the following question "Is the interaction between group (CU/CI) and cortisol significant regressing out the effect of sex, age, APOE_carrier, abeta and ptau?" It seems like the contrast would be the same as before.. Can you guys help me with this?
Thanks in advance!
*Laura Willers de Souza *
PhD Student in Pharmacology and Therapeutics
Zimmer Lab - Federal University of Rio Grande do Sul
- Porto Alegre/RS - Brazil
yes, it is the same contrast
On 11/20/2023 3:30 PM, Laura Willers de Souza wrote:
External Email - Use Caution
Great, thanks so much! But I am having difficulty understanding how to construct the contrast to answer the following question "Is the interaction between group (CU/CI) and cortisol significant regressing out the effect of sex, age, APOE_carrier, abeta and ptau?" It seems like the contrast would be the same as before.. Can you help me with this?
Thanks again!
*Laura Willers de Souza *
PhD Student in Pharmacology and Therapeutics
Zimmer Lab - Federal University of Rio Grande do Sul
- Porto Alegre/RS - Brazil
Douglas N. Greve https://secure-web.cisco.com/1yYgRLzmOCtuh8UFLaxt4ucohab6Ii9cqIDNXc9_tUgQITTp1lOWVlAhzXYGkoInMWkZJnqBum7Q2bchzciGSB2Na5ppT64MdUHXfn7DI7OxVbl4tT_fQgG0kh4IlbeSX880ZgCJICom9qj1NBstIOI_qjcTChjXuR3dPdszFYItn-gVUJfGCKXlG9o7fhLWguzZ50_ydhnvD4rOrLoYLiBMx5Nmfxu8b5Qmskd6WJN4ex-Jbo86HQs-OZhybUtFxJTLMjaMs7VA2KehPsIkWC3mSNsPAK9OmfLQGqixmeiXleO-ZWJPtFvWKnaHcn4WLC4dwagoumvUqRgC7u1xm6-Cyydvyaps-m9D_aFSH-mc/https%3A%2F%2Fwww.mail-archive.com%2Fsearch%3Fl%3Dfreesurfer%40nmr.mgh.harvard.edu%26q%3Dfrom%3A%2522Douglas%2BN.%2BGreve%2522 Wed, 15 Nov 2023 06:54:36 -0800 https://secure-web.cisco.com/1YP7c0yUfORmuLGAmHVodnKa9al2_Y0u_TMgwZ8HHpNLBopCps66WL5fi8BIQOtGT2EIe686Cb-kKvvGhRCe4_SaK0WJ3KOn4c9Sj2WdQqojkvfBeHT3N0kEtpp4XZYzhlfT_eJ5jkScsByN1WqEs3tHZcGwdZjDYiA2VHhgtKgDSnuHH09-N9wy-MRx6r58e_5aLN4OM9T2RKO6OnJ5mx8nK9pUHOSr26E4tD08yymXHHwjtsv4xTNRM0PO-47K6TZb26i11we8tVt1lnats3dUctrHhexXc9YvBQKMu_pUzZw2Ma-p89k7jGVEZBbCbg5alwGGg9GzThW3Fv1_YxTcKTYDjh20IrtgY3QjPvlU/https%3A%2F%2Fwww.mail-archive.com%2Fsearch%3Fl%3Dfreesurfer%40nmr.mgh.harvard.edu%26q%3Ddate%3A20231115
Yes, that looks right (assuming that cortisol is your first variable) ---- On 11/7/2023 3:49 PM, Laura Willers de Souza wrote: External Email - Use Caution Hello FreeSurfer Developers, Following the FSGD examples on the website, I built the following test: Question: Is there an association between cortisol and cortical thickness regressing out the effect of sex, age, APOE4_carrier (1=1 or 2 alleles, 0=no alleles), abeta, ptau, diagnosis (CU and CI)? Regressors: 2 factors (sex, diagnosis) with 2 levels each, 5 covariates (age, APOE4_carrier (1=1 or 2 alleles, 0=no alleles), abeta, ptau, cortisol) >> 24 regressors Contrast: 0 0 0 0 0.5 -0.5 0.5 -0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 FSGD: GroupDescriptorFile 1 Title CSF_semgrupos Class MaleCU Class MaleCI Class FemaleCU Class FemaleCI Variables Cortisol Age ABETA ptau APOE4_carrier Input 098_S_4003_I224603 MaleCI 11 81.3 741.5 22.83 1 Does this feel right to you? I am having difficulty understanding how to construct the contrast to answer the following question "Is the interaction between group (CU/CI) and cortisol significant regressing out the effect of sex, age, APOE_carrier, abeta and ptau?" It seems like the contrast would be the same as before.. Can you guys help me with this? Thanks in advance! *Laura Willers de Souza * PhD Student in Pharmacology and Therapeutics Zimmer Lab - Federal University of Rio Grande do Sul - Porto Alegre/RS - Brazil
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