mri_surf2vol in fsaverage space - Freesurfer - mail.nmr.mgh.harvard.edu

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mri_surf2vol in fsaverage space

area of a fsaverage label

Re: [Freesurfer] view inflated...

Govindarajan, Koushik Athreya

3 Dec 2013 3 Dec '13

10 a.m.

Dear Freesurfers,

I am trying to export the cortical thickness maps in nifti format using the mri_surf2vol command. Is it possible to get these output files in the fsaverage space (1x1x1 mm3) instead of the native space.

Thanks Koushik

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Douglas N Greve

3 Dec 3 Dec

10:13 a.m.

Convert the thickness maps to fsaverage using mri_surf2surf, then use mri_surf2vol doug On 12/03/2013 10:00 AM, Govindarajan, Koushik Athreya wrote:

Dear Freesurfers,
       I am trying to export the cortical thickness maps in nifti 
format using the mri_surf2vol command. Is it possible to get these output files in the fsaverage space (1x1x1 mm^3 ) instead of the native space.

Thanks

Koushik

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Douglas N Greve
Govindarajan, Koushik Athreya