Have you seen this tutorial? https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultipleComparisonsV6.0... it uses permutation (which does not work with weighted least squares), but you could change it to use the old monte carlo stuff.

On 7/29/19 2:15 PM, FAST Study wrote:

External Email - Use Caution

Dear Dr. Greve:

Thank you for your help.

I see the attached outputs from the paired t-test - please see attached image. I hope to correct for multiple comparisons, e.g.,

mri_glmfit-sim --glmdir my-glm.wls --cache 3 pos --cwp .05 --3spaces

What is the --glmdir - or input? - in the command?

Thanks!

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