Hi,
I'm getting the error WARNING: tag image orientation not found during the mri_convert step of recon-all. The log file is attached here. I am using version freesurfer_v.5.1.0 on Linux RHEL6. I am submitting a job to qsub (command lines in script FSscript3 attached). Any help would be greatly appreciated! Thanks!
Your dicom file is missing tag 20,37 (the image orientation), which makes it impossible to compute the direction cosines. What is the source of this dicom file? Has it been anonymized? doug
On 05/09/2012 12:03 PM, Mary Ellen Koran wrote:
Hi,
I'm getting the error WARNING: tag image orientation not found during the mri_convert step of recon-all. The log file is attached here. I am using version freesurfer_v.5.1.0 on Linux RHEL6. I am submitting a job to qsub (command lines in script FSscript3 attached). Any help would be greatly appreciated! Thanks!
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Douglas N Greve -
Mary Ellen Koran