I have a MPRAGE scan, with slight atrophy on right side of brain. Recon-all is crashing (see error below). Can anyone help me with this, so I can get a reasonably parcellated brain?
*CORRECTING DEFECT 6 (vertices=151, convex hull=90) After retessellation of defect 6, euler #=-52 (54998,159712,104662) : difference with theory (-57) = -5
CORRECTING DEFECT 7 (vertices=27939, convex hull=5437) normal vector of length zero at vertex 60965 with 0 faces vertex 60965 has 0 face Numerical result out of range Linux compute-0-4.local 2.6.18-194.17.4.el5 #1 SMP Mon Oct 25 15:50:53 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s . exited with ERRORS at Sat Sep 1 02:01:53 EDT 2012*
thanks
Is the cerebellum still attached? doug
On 09/14/2012 02:01 PM, Blessy M wrote:
I have a MPRAGE scan, with slight atrophy on right side of brain. Recon-all is crashing (see error below). Can anyone help me with this, so I can get a reasonably parcellated brain?
/CORRECTING DEFECT 6 (vertices=151, convex hull=90) After retessellation of defect 6, euler #=-52 (54998,159712,104662) : difference with theory (-57) = -5
CORRECTING DEFECT 7 (vertices=27939, convex hull=5437) normal vector of length zero at vertex 60965 with 0 faces vertex 60965 has 0 face Numerical result out of range Linux compute-0-4.local 2.6.18-194.17.4.el5 #1 SMP Mon Oct 25 15:50:53 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s . exited with ERRORS at Sat Sep 1 02:01:53 EDT 2012/
thanks
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Blessy M -
Douglas N Greve