Hi Paula

sure, we segment left and right caudate as part of recon-all (in addition to pallidum, putamen, ventricles, amygdala, hippocampus, etc....)

cheers Bruce On Sun, 29 Jan 2012, Paula Banca wrote:

Dear Freesurfer's,

I'm wondering if it is possible to use FreeSurfer to do the caudate segmentation automatically.  I'm asking that because I did all my fMRI data analysis in BrainVoyager and currently I need to run more statistical analysis in this specific region (caudate). For that I need to have this ROI.  However, to create it manually in BV I would need a lot of time.  I'd like to check if there is a possibility to create this ROI automatically,using Freesurfer, and then export it to BV in order to finish my functional analysis there. Do you think this can be done ?

Thanks in advance!

All the best, Paula