---------- Forwarded message ---------- From: Cristian Paz pazcristian99@gmail.com Date: 2013/8/14 Subject: Re: [Freesurfer] FS version To: Bruce Fischl fischl@nmr.mgh.harvard.edu

Thank you for your reply! now - on the third try, I left it for three hours without checking and now it is actually running fiurther. great!

what types of problem do I risk if if I use different versions? Will it be correct if it successfully runs or could there be errors?

best, Cris

2013/8/14 Bruce Fischl fischl@nmr.mgh.harvard.edu

how long do you wait? In general it's a bad idea to mix version

Bruce

On Wed, 14 Aug 2013, Cristian Paz wrote:

because every time I try to run

...

recon-all -autorecon-pial -s 101 it seems to hang up here and nothing more happens :

______________________________**______________________ #@# Sphere lh Wed Aug 14 14:42:06 CEST 2013 /media/Secure_HDD/patients/**101/scripts

mris_sphere -seed 1234 ../surf/lh.inflated ../surf/lh.sphere

setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.57 2011/03/02 00:04:34 nicks Exp $ $Id: mrisurf.c,v 1.693.2.2 2011/04/27 19:21:05 nicks Exp $ reading original vertex positions... unfolding cortex into spherical form... surface projected - minimizing metric distortion... ______________________________**________________________

Could this have to do with FreeSurfer version maybe?

Cris

2013/8/14 Cristian Paz pazcristian99@gmail.com Dear experts!

I have a question.

I have run recon-all on a cluster , and I am editing on my local machine. I just checked the versions and I see that I have:

freesurfer-x86_64-redhat-**linux-gnu-stable5-20110522 at the computing cluster and

freesurfer-Linux-centos4_x86_**64-stable-pub-v5.1.0 on my local computer....

Is this a problem?

Thank you very much for your help.

Kind regards Cris

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