Hi Matt,

Thank you for your reply. It is impossible to convert label file to stl file, is it wright? If it was so, do you know how to get it? I want to get stl files which divided into each percellation, if its possible.

Thanks in advance,

Yuki.

Date: Thu, 10 Jul 2014 10:25:19 -0500 From: matt@ma-tea.com To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Convert label file to STL file‏

It probably thinks the STL file is just a mesh without coloring. Peace, Matt. From: Mat yuki matsuyuki2014@outlook.jp Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Thursday, July 10, 2014 at 7:19 AM To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Convert label file to STL file‏

Dear Freesurfer Experts,

I'm trying to convert .label file to .stl file. In more detail of my purpose, I want to get separate stl files of whole brain. Now, I want to make stl files of label files which made from ?h.aparc.a2009s.annot.

First, I tried to convert lh.pial to lh.pial.stl, I've got it (this was just check how mris_convert works). Second, I copied lh. white file from surf dir into label dir. Then, I runed next command:

cd <subjid>/label mris_convert --label lh.bankssts.label bankssts lh.white lh.bankssts.label.stl

And got the error message: ERROR: unknown file annot file type specified for output: lh.bankssts.label.stl

Do you know what could have gone wrong?

Thank you, Yuki. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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