I knew this question has been asked before and it was suggested to use SupraTentorial as the whole brain volume. I am working with ADNI data and cannot find this measurement from UCSFFSL table. As my understanding, UCSFFSL table was generated by Freesurfer 4.4. I was wondering which structures I should add up to get whole brain volume for comparison between AD, MCI, and normal people. Thanks Sean
Cortical Gray matter volume + Cortical white matter + subcortical gray volume + cerebellum subcortical gray is:
Left_Thalamus Right_Thalamus Left_Thalamus_Proper Right_Thalamus_Proper Left_Caudate Right_Caudate Left_Putamen Right_Putamen Left_Pallidum Right_Pallidum Left_Hippocampus Right_Hippocampus Left_Amygdala Right_Amygdala Left_Accumbens_area Right_Accumbens_area Left_VentralDC Right_VentralDC
doug
On 11/02/2012 10:48 AM, Zhiyong Xie wrote:
I knew this question has been asked before and it was suggested to use /SupraTentorial/ as the whole brain volume. I am working with ADNI data and cannot find this measurement from UCSFFSL table. As my understanding, UCSFFSL table was generated by Freesurfer 4.4. I was wondering which structures I should add up to get whole brain volume for comparison between AD, MCI, and normal people. Thanks Sean
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Douglas N Greve -
Zhiyong Xie