Hi,
using tksurfer, I have created labels corresponding to significantly thinner cortex between two groups of my subjects. After that I converted the labels to volumes (mri_label2vol), which I would like to use for further analysis. However, the volumes cover only the interface between gray and white matter, while I would need the entire cortex. Is there any way to achieve this?
Thanks in advance,
Martin
freesurfer@nmr.mgh.harvard.edu