Hi Aya

you should ask them I guess. I followed one of the links, and despite the lack of citations it looks like they are using FreeSurfer surfaces as the basis of their parcellation, so there should be a way to go from their atlas coordinates to ours for any given subject.

cheers Bruce

On Thu, 3 Nov 2016, Aya Kabbara wrote:

Dear FreeSurfer team,

First, I would like to thank you for your interesting and very helpful tool.

Actually, I’m beginner in using Freesurfer.

I have an individual anatomy (.nii) for each subject . After reconstructing the surface using free surfer, I would like to link the surface to the brainnetome atlas. http://atlas.brainnetome.org

[atlas.brainnetome.org--thumb.jpg] Brainnetome Atlas | Home atlas.brainnetome.org Brainnetome atlas Brainnetome atlas will be an in vivo map, with more fine-grained functional brain subregions and detailed anatomical and functional connection ...

I wonder how can we link automatically the two surfaces using Freesurfer.

Thank you for your help.

Aya