External Email - Use Caution
Freesurfer releases require various linux system libraries/packages to be installed on the system in order for the binaries to run. Expanding a tar archive does not perform any dependency checks or subsequently try to install what is needed for everything to run, i.e., it is not practical for us to try and troubleshoot an individual users setup and identify what is missing when a binary fails to run. We can't prevent someone from expanding the installer packages like tar files into some arbitrary location, but we only support linux setups where an actual install has been done with the .rpm or .deb file. One option is to test running a new version of freesurfer in a container or VM where you should have admin/root privileges to do the install.
- R.
On 6/25/26 07:15, Hewitt, Manuel (manuel.hewitt@med.uni-goettingen.de) wrote:
Hi, we have been using FS 7.4.1 on Rocky 8 and would like to use FS 8.x, specifically 8.2.0.Before we installed FS in a user directory, not system-wide.For 8.x there are no releases as tar.gz archives anymore. Even the Rocky 9 archive was only added half a year later. Have these archives been discontinued? MFG, Manuel Hewittwissenschaftlicher Mitarbeiter UNIVERSITÄTSMEDIZIN GÖTTINGENGEORG-AUGUST-UNIVERSITÄTKlinik für NeurologieRobert-Koch-Straße 4037075 GöttingenBriefpost 37099 GöttingenTelefon +49 551 39-62355Fax +49 551 39-8126Email manuel.hewitt@med.uni-goettingen.dehttps://neurologie.umg.eu/%C2%A0;
External Email - Use Caution
_______________________________________________ Freesurfer mailing list -- freesurfer@nmr.mgh.harvard.edu To unsubscribe send an email to freesurfer-leave@nmr.mgh.harvard.edu https://secure-web.cisco.com/1QI5Jp55uVxO5nHVTQ0oAoIirelSqEhOLb-Zm1G0FWMruxi... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://secure-web.cisco.com/15DpN-5nqAKgW2CNTxkMlhTawoT0_yltL_OpHVSOA9_ptQD... <https://secure-web.cisco.com/1z0Kb0bpJbwJTSLYptBCtwDQfBqUPmw3smkhLNbv1UMCC7v...; . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
External Email - Use Caution
TAR archives were useful to install without root privileges. However deb files can be extracted in a similar way with dpkg-deb or ar+tar commands, I'm actually using this approach for latest versions.
Maurilio Genovese
Il ven 26 giu 2026, 00:14 fsbuild fsbuild@contbay.com ha scritto:
External Email - Use CautionFreesurfer releases require various linux system libraries/packages to be installed on the system in order for the binaries to run. Expanding a tar archive does not perform any dependency checks or subsequently try to install what is needed for everything to run, i.e., it is not practical for us to try and troubleshoot an individual users setup and identify what is missing when a binary fails to run. We can't prevent someone from expanding the installer packages like tar files into some arbitrary location, but we only support linux setups where an actual install has been done with the .rpm or .deb file. One option is to test running a new version of freesurfer in a container or VM where you should have admin/root privileges to do the install.
- R.
On 6/25/26 07:15, Hewitt, Manuel (manuel.hewitt@med.uni-goettingen.de) wrote:
Hi,
we have been using FS 7.4.1 on Rocky 8 and would like to use FS 8.x, specifically 8.2.0.
Before we installed FS in a user directory, not system-wide.
For 8.x there are no releases as tar.gz archives anymore. Even the Rocky 9 archive was only added half a year later.
Have these archives been discontinued?
MFG,
Manuel Hewitt
wissenschaftlicher Mitarbeiter
UNIVERSITÄTSMEDIZIN GÖTTINGEN
GEORG-AUGUST-UNIVERSITÄT
Klinik für Neurologie
Briefpost 37099 Göttingen
Telefon +49 551 39-62355
Fax +49 551 39-8126
Email manuel.hewitt@med.uni-goettingen.de
https://secure-web.cisco.com/1cObyYWXdYAuOYzlWwP7Sjtn7dWWvPotKmfDikn1bW-wfVF... https://secure-web.cisco.com/10RBM1M-alXji3WAezqAzDUhRJBMv3Sb3vcdT1jYbICAE0zQIc0_NPu0zhesEfEaJwwCDLZHIq8m_YgYytOiaU62u3O8IF5VlPbYcKKMBqv75HbS2mu6M3jEPh3wdkTUDVMwHRio-mQgIzqd_c0d_LReZXiq49g406t5vC8vZZVfM5KPAV_1yMfRibvYRC4crMOHs6Shk0rBe82W1wGuWaMMzpuIgk6BNkzU6MJDpg382UFngySPCxhzC475mFk0e85r8hlNre03CceoAHS5zWyj-voZewpp7HcJT-W7N9EzCPsKKsbrMxmTwr9RveHF3yl3vndLsuxbkfSs2tiyDjA/https%3A%2F%2Fneurologie.umg.eu%2F
External Email - Use Caution
Freesurfer mailing list -- freesurfer@nmr.mgh.harvard.edu To unsubscribe send an email to freesurfer-leave@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman3/lists/freesurfer@nmr.mgh.harvard.e... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://secure-web.cisco.com/1aqKlgapAANu98KKpNYy3N6xeCsihCdRARflZAbzYOEXe5j... https://secure-web.cisco.com/1aqKlgapAANu98KKpNYy3N6xeCsihCdRARflZAbzYOEXe5jAIJkl1Vk6dLR1W7FI0JU7gyVN5IzHYCP3wPobPPOyIcl3eIlkb-Km1Rj05KZEcAHZjelLTc_Re90maLQhbcGxLQrWB3niR3SzB0keysCCXcSMgYxFmORtjmEby02if-1CWgBT7qjpWSutednvMqQhhgyv6BOuR02UItf7xtmF3otCyXafJ-qDBolMcXicHOZDoguwlLI_rGjhA0Ncp_pA9EfTrW-hg7QJUalOwP6tE6iTMbi6bUPPUKuYqiUw1JefqINEAW2l22dVfFxL0h5lB0wdXvYcwkCz0shd2RA/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
Freesurfer mailing list -- freesurfer@nmr.mgh.harvard.edu To unsubscribe send an email to freesurfer-leave@nmr.mgh.harvard.edu
https://secure-web.cisco.com/17lXCOh26b1T7Z2JEBevqwyd6j03hqb4mAPcbLi0vTG6cjE... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://secure-web.cisco.com/1aqKlgapAANu98KKpNYy3N6xeCsihCdRARflZAbzYOEXe5j... < https://secure-web.cisco.com/1aqKlgapAANu98KKpNYy3N6xeCsihCdRARflZAbzYOEXe5j... .
I’m well aware of the difference between an archive and a package. But that didn’t stop FS to release archives in the past until 8.x.
The wiki even mentions the archives as a fallback in the section for 7.x and 8.x. And we never had issues using these for many years. I also checked the release notes and could not find any mention of archives being discontinued. And that’s why I asked if they are discontinued.
VM/container is an option but one that is not always available. But we have now an unpacked package and will use that.
PS: Your answer sound like you speak for the FS team (‘we’), but all I can see is the name “R” and what looks like a disposable anonymous email address. It would be nice to know if someone speaks officially for the team.
MFG,
Manuel Hewitt
Von: fsbuild fsbuild@contbay.com Gesendet: Freitag, 26. Juni 2026 00:13 An: freesurfer@nmr.mgh.harvard.edu Betreff: [+externe Mail+] [Freesurfer] Re: Rocky 8 support and tar.gz archives
External Email - Use Caution
Freesurfer releases require various linux system libraries/packages to be installed on the system in order for the binaries to run. Expanding a tar archive does not perform any dependency checks or subsequently try to install what is needed for everything to run, i.e., it is not practical for us to try and troubleshoot an individual users setup and identify what is missing when a binary fails to run. We can't prevent someone from expanding the installer packages like tar files into some arbitrary location, but we only support linux setups where an actual install has been done with the .rpm or .deb file. One option is to test running a new version of freesurfer in a container or VM where you should have admin/root privileges to do the install.
- R.
On 6/25/26 07:15, Hewitt, Manuel ( mailto:manuel.hewitt@med.uni-goettingen.de manuel.hewitt@med.uni-goettingen.de) wrote:
Hi,
we have been using FS 7.4.1 on Rocky 8 and would like to use FS 8.x, specifically 8.2.0.
Before we installed FS in a user directory, not system-wide.
For 8.x there are no releases as tar.gz archives anymore. Even the Rocky 9 archive was only added half a year later.
Have these archives been discontinued?
MFG,
Manuel Hewitt
wissenschaftlicher Mitarbeiter
UNIVERSITÄTSMEDIZIN GÖTTINGEN
GEORG-AUGUST-UNIVERSITÄT
Klinik für Neurologie
Robert-Koch-Straße 40
37075 Göttingen
Briefpost 37099 Göttingen
Telefon +49 551 39-62355
Fax +49 551 39-8126
Email mailto:manuel.hewitt@med.uni-goettingen.de manuel.hewitt@med.uni-goettingen.de
https://secure-web.cisco.com/10RBM1M-alXji3WAezqAzDUhRJBMv3Sb3vcdT1jYbICAE0zQIc0_NPu0zhesEfEaJwwCDLZHIq8m_YgYytOiaU62u3O8IF5VlPbYcKKMBqv75HbS2mu6M3jEPh3wdkTUDVMwHRio-mQgIzqd_c0d_LReZXiq49g406t5vC8vZZVfM5KPAV_1yMfRibvYRC4crMOHs6Shk0rBe82W1wGuWaMMzpuIgk6BNkzU6MJDpg382UFngySPCxhzC475mFk0e85r8hlNre03CceoAHS5zWyj-voZewpp7HcJT-W7N9EzCPsKKsbrMxmTwr9RveHF3yl3vndLsuxbkfSs2tiyDjA/https%3A%2F%2Fneurologie.umg.eu%2F https://secure-web.cisco.com/1UcXsqNjgfWaCzrdwx1n2jU9yCxUF0Sia_GDT26LaLCrsGO...
External Email - Use Caution
_______________________________________________ Freesurfer mailing list -- mailto:freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu To unsubscribe send an email to mailto:freesurfer-leave@nmr.mgh.harvard.edu freesurfer-leave@nmr.mgh.harvard.edu https://secure-web.cisco.com/1h8ghSQQw_-8ank4Dlol-Z6fIA3Yi8kVLmZOHi9OoBAfxfpnFfoTs524VAcgMzzagTi9vMmhYUmyOchrfrfjFzbMF2bKjIdOAndRB0FhLi8Y6rxSe1pbYizYbiuvN1-rfIPuSMLCC6aQeEeSn0AlwhK2F6IFi1nddfOjx_EO5NTz2OIpKvW_6oKZ1MrA-RVzDdsBrlucDjNij4Rmvv42dSWE18fJQQ7rDkG3nEE4kOpWJDs42UOrptx6ysxL4Nciouf9Ag-mkWn7oqm8sHpObYuqK0Gx7ob_p9uiUwwDSapF7J4mTJNzgCX3s9_mtfeO3/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman3%2Flists%2Ffreesurfer%40nmr.mgh.harvard.edu%2F https://secure-web.cisco.com/1h8ghSQQw_-8ank4Dlol-Z6fIA3Yi8kVLmZOHi9OoBAfxfp... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://secure-web.cisco.com/1G1IQRGnEDFyPGifXVWEkkmh1HL1bTdLFBj-vZibDz98tiLEAKIOfpl94FFZdnb3kQj4b0b6Kyw5A0v2LEYwqN2x4mkIY8BkXSMmhzeLdpHL-160Iu-mzRMVC9dV-HoGJ3-yRk8ODTNYGzue1uqtZl1y2ISNhii2wqT68_HqPFPEwymY-hw2h5KdzGED989_jwJXCDhC7CN-AZ3zRKUJDMbpHtnAj0aDaAK6m6_l74yHgvRzDt8eJiyvg921w9furwoKVrmn1_-Vlo6pKPJNxRsgW6HnTTN4yF7cjmGyYcgLPbkoXZCJ4uVp_WV6-Sdmp/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline https://secure-web.cisco.com/1G1IQRGnEDFyPGifXVWEkkmh1HL1bTdLFBj-vZibDz98tiL... < https://secure-web.cisco.com/1G1IQRGnEDFyPGifXVWEkkmh1HL1bTdLFBj-vZibDz98tiLEAKIOfpl94FFZdnb3kQj4b0b6Kyw5A0v2LEYwqN2x4mkIY8BkXSMmhzeLdpHL-160Iu-mzRMVC9dV-HoGJ3-yRk8ODTNYGzue1uqtZl1y2ISNhii2wqT68_HqPFPEwymY-hw2h5KdzGED989_jwJXCDhC7CN-AZ3zRKUJDMbpHtnAj0aDaAK6m6_l74yHgvRzDt8eJiyvg921w9furwoKVrmn1_-Vlo6pKPJNxRsgW6HnTTN4yF7cjmGyYcgLPbkoXZCJ4uVp_WV6-Sdmp/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline https://secure-web.cisco.com/1G1IQRGnEDFyPGifXVWEkkmh1HL1bTdLFBj-vZibDz98tiL... . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
External Email - Use Caution
freesurfer@nmr.mgh.harvard.edu
-
fsbuild -
Hewitt, Manuel -
Maurilio Genovese