External Email - Use Caution
Hi,
I am running analysis to compare group difference in thickness between two groups. I followed all the steps outlined on the wiki: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis. Everything seemed to work fine except I didn't get the following files in each contrast's directory
efficiency.dat pcc.mgh z.mgh
I don't understand why those files don't show up as I didn't get any errors. Any help is appreciated.
Best, Srishti Social/Clinical Research Specialist Child Imaging Research and Life Experiences Lab University of North Carolina at Chapel Hill email (W): srishtig@email.unc.edu skype: srishti.goel12
What version of FS are you using? The pcc may only be in the v6.
On 09/24/2018 12:10 PM, srishti goel wrote:
External Email - Use Caution
Hi,
I am running analysis to compare group difference in thickness between two groups. I followed all the steps outlined on the wiki: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis. Everything seemed to work fine except I didn't get the following files in each contrast's directory
efficiency.dat pcc.mgh z.mgh
I don't understand why those files don't show up as I didn't get any errors. Any help is appreciated.
Best, Srishti Social/Clinical Research Specialist Child Imaging Research and Life Experiences Lab University of North Carolina at Chapel Hill email (W): srishtig@email.unc.edu mailto:srishtig@email.unc.edu skype: srishti.goel12
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
Alright, yes I am using 5.3. What about the efficiency and z files?
Best, Srishti Social/Clinical Research Specialist Child Imaging Research and Life Experiences Lab University of North Carolina at Chapel Hill email (W): srishtig@email.unc.edu skype: srishti.goel12
On Mon, Sep 24, 2018 at 12:36 PM Greve, Douglas N.,Ph.D. < DGREVE@mgh.harvard.edu> wrote:
What version of FS are you using? The pcc may only be in the v6.
On 09/24/2018 12:10 PM, srishti goel wrote:
External Email - Use CautionHi,
I am running analysis to compare group difference in thickness between two groups. I followed all the steps outlined on the wiki: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis. Everything seemed to work fine except I didn't get the following files in each contrast's directory
efficiency.dat pcc.mgh z.mgh
I don't understand why those files don't show up as I didn't get any errors. Any help is appreciated.
Best, Srishti Social/Clinical Research Specialist Child Imaging Research and Life Experiences Lab University of North Carolina at Chapel Hill email (W): srishtig@email.unc.edu mailto:srishtig@email.unc.edu skype: srishti.goel12
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
I can't remember that far back:), but it would not surprise me if they were not there in 5.3. You can always use the v6 mri_glmfit with 5.3 data.
On 09/24/2018 12:39 PM, srishti goel wrote:
External Email - Use Caution
Alright, yes I am using 5.3. What about the efficiency and z files?
Best, Srishti Social/Clinical Research Specialist Child Imaging Research and Life Experiences Lab University of North Carolina at Chapel Hill email (W): srishtig@email.unc.edu mailto:srishtig@email.unc.edu skype: srishti.goel12
On Mon, Sep 24, 2018 at 12:36 PM Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu mailto:DGREVE@mgh.harvard.edu> wrote:
What version of FS are you using? The pcc may only be in the v6. On 09/24/2018 12:10 PM, srishti goel wrote: > > External Email - Use Caution > > Hi, > > I am running analysis to compare group difference in thickness between > two groups. I followed all the steps outlined on the wiki: > https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis. > Everything seemed to work fine except I didn't get the following files > in each contrast's directory > > efficiency.dat > pcc.mgh > z.mgh > > I don't understand why those files don't show up as I didn't get any > errors. Any help is appreciated. > > Best, > Srishti > Social/Clinical Research Specialist > Child Imaging Research and Life Experiences Lab > University of North Carolina at Chapel Hill > email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > skype: srishti.goel12 > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
I understand. Thank you so much! :)
Best, Srishti Social/Clinical Research Specialist Child Imaging Research and Life Experiences Lab University of North Carolina at Chapel Hill email (W): srishtig@email.unc.edu skype: srishti.goel12
On Mon, Sep 24, 2018 at 12:46 PM Greve, Douglas N.,Ph.D. < DGREVE@mgh.harvard.edu> wrote:
I can't remember that far back:), but it would not surprise me if they were not there in 5.3. You can always use the v6 mri_glmfit with 5.3 data.
On 09/24/2018 12:39 PM, srishti goel wrote:
External Email - Use CautionAlright, yes I am using 5.3. What about the efficiency and z files?
Best, Srishti Social/Clinical Research Specialist Child Imaging Research and Life Experiences Lab University of North Carolina at Chapel Hill email (W): srishtig@email.unc.edu mailto:srishtig@email.unc.edu skype: srishti.goel12
On Mon, Sep 24, 2018 at 12:36 PM Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu mailto:DGREVE@mgh.harvard.edu> wrote:
What version of FS are you using? The pcc may only be in the v6. On 09/24/2018 12:10 PM, srishti goel wrote: > > External Email - Use Caution > > Hi, > > I am running analysis to compare group difference in thickness between > two groups. I followed all the steps outlined on the wiki: > https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis.
> Everything seemed to work fine except I didn't get the following files > in each contrast's directory > > efficiency.dat > pcc.mgh > z.mgh > > I don't understand why those files don't show up as I didn't get any > errors. Any help is appreciated. > > Best, > Srishti > Social/Clinical Research Specialist > Child Imaging Research and Life Experiences Lab > University of North Carolina at Chapel Hill > email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > skype: srishti.goel12 > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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srishti goel