I don't think there is a command to do this. I'd probably do it in matlab. Info about the coordinates can be found here https://surfer.nmr.mgh.harvard.edu/fswiki/CoordinateSystems Each mgz volume has a voxel-to-RAS matrix, if you invert that, and multiply your RAS you will get the column, row, slice from which you can extract the value

On 4/25/16 10:02 PM, prasser wrote:

Hi,

Could you please let me know the command that takes say, ras coordinates (or a list of them) and a .mgz as input, and outputs the corresponding voxel values from the .mgz?

Thanks.

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