Please note the command we used:

mri_mask brainmask.mgz lh.stg.mask.mgz brainout.mgz

and the result we got was:

Writing masked volume to brainout.mgz...done.

On Fri, May 9, 2008 at 2:39 PM, Daniel H Choi dhchoi@u.northwestern.edu wrote:

Hi,

I have tried applying a binary mask, specifically for STG, in conjunction with the mri_mask command. We applied it to a brainmask volume, but we did not get the result we wanted. The output we recieved was simply the mask that we used. We wish to produce an output that gives the STG volume alone from the brain, and not from the binary mask. Are we using the command incorrectly? Thanks

-- Daniel Horim Choi Northwestern University Class of 2009 dhchoi@u.northwestern.edu or dchoi1024@gmail.com