Dear Freesurfer community,
Just a simple question : is there a command-line that allows averaging voxel values from different time frames, transforming dynamic 4D volume into a static 3D volume ? mri_convert allows to skip some early frames (--nskip) or drop some at the end (--ndrop), but I don't see any option for averaging.
Thanks for your help,
Best,
Hi Christopher, try mri_concat 4dvolume.nii --mean --o 3dvolume.nii doug
On 10/05/2012 03:05 AM, Christopher Coello wrote:
Dear Freesurfer community,
Just a simple question : is there a command-line that allows averaging voxel values from different time frames, transforming dynamic 4D volume into a static 3D volume ? mri_convert allows to skip some early frames (--nskip) or drop some at the end (--ndrop), but I don't see any option for averaging.
Thanks for your help,
Best,
Works fine.
Thanks Doug.
On 05.10.2012 18:37, Douglas N Greve wrote:
Hi Christopher, try mri_concat 4dvolume.nii --mean --o 3dvolume.nii doug
On 10/05/2012 03:05 AM, Christopher Coello wrote:
Dear Freesurfer community,
Just a simple question : is there a command-line that allows averaging voxel values from different time frames, transforming dynamic 4D volume into a static 3D volume ? mri_convert allows to skip some early frames (--nskip) or drop some at the end (--ndrop), but I don't see any option for averaging.
Thanks for your help,
Best,
freesurfer@nmr.mgh.harvard.edu