Hello !
I work for the department of radiology, Emory University.
We're planning to use the FreeSurfer software suite (or more precisely, the surface-based stream ) in a project that aims to compare cortical thickness between treatment and nontreatment patients.
We have finished recon-all for all patients. And next will do group analysis.
We need to rebuild fsaverage for data reconstruction. However, we cannot find any information about that process. Is anybody kindly provide some suggestions about that?
Thank you very much!
Lawrence Wang
Radiology Department,
Emory University
why do you need rebuilt fsaverage?
On 06/03/2016 05:06 PM, shi yao wang wrote:
Hello !
I work for the department of radiology, Emory University.
We're planning to use the FreeSurfer software suite (or more precisely, the surface-based stream ) in a project that aims to compare cortical thickness between treatment and nontreatment patients. We have finished recon-all for all patients. And next will do group analysis. We need to rebuild fsaverage for data reconstruction. However, we cannot find any information about that process. Is anybody kindly provide some suggestions about that? Thank you very much!
Lawrence Wang Radiology Department, Emory University
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Lawrence
you can you the
make_average_subject
script, but as Doug implies you probably don't need to. Our warp is high-enough dimensional that you rarely need to build average subjects from your own population
cheers Bruce
On Fri, 3 Jun 2016, shi yao wang wrote:
Hello !
I work for the department of radiology, Emory University.
We're planning to use the FreeSurfer software suite (or more precisely, the surface-based stream ) in a project that aims to compare cortical thickn ess between treatment and nontreatment patients.
We have finished recon-all for all patients. And next will do group analysis .
We need to rebuild fsaverage for data reconstruction. However, we cannot fin d any information about that process. Is anybody kindly provide some suggest ions about that?
Thank you very much!
Lawrence Wang
Radiology Department,
Emory University
freesurfer@nmr.mgh.harvard.edu