External Email - Use Caution
Dear Team,
I have tried creating binary CSF mask from
# CSF: # - 4: Left-Lateral-Ventricle # - 14: 3rd-Ventricle # - 43: Right-Lateral-Ventricle
but I would like to know whether is it possible for us to get outer CSF similar to fastsurfer.
Any help would be highly appreciated.
Thank you.
FreeSurfer does not segment extracerebral CSF. You can use samseg (samseg --i orig.mgz --o samseg) and look at the samseg/seg.mgz file
On 12/13/2022 1:46 AM, priya padma wrote:
External Email - Use Caution
Dear Team,
I have tried creating binary CSF mask from # CSF: # - 4: Left-Lateral-Ventricle # - 14: 3rd-Ventricle # - 43: Right-Lateral-Ventricle but I would like to know whether is it possible for us to get outer CSF similar to fastsurfer. Any help would be highly appreciated. Thank you. -- Best Regards Padma Priya /AI Developer / / / /PhenoMx, Inc./ /priya@phenomx.ai | (+82)10-5405-2685/ / /
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
-
Douglas N. Greve -
priya padma