There seems to be two problems with the recon. First the pia seems to be intruding into the white matter Then in the other hemisphere there seems to be a hole in the white matter Is there a way to fix this? Please see attached pictures Thanks for your help
Hi Nils,
I'm unable to see your pictures from here, but the things you are describing are generally fixable. I think the following two wiki pages should help you get started!
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/PialEdits https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/WhiteMatterEdits
Jenni
On Wed, Jul 9, 2008 at 2:42 PM, nils rettby nils.rettby@gmail.com wrote:
There seems to be two problems with the recon. First the pia seems to be intruding into the white matter Then in the other hemisphere there seems to be a hole in the white matter Is there a way to fix this? Please see attached pictures Thanks for your help
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
-
Jenni Pacheco -
nils rettby