Hi Nils,
I'm unable to see your pictures from here, but the things you are describing are generally fixable. I think the following two wiki pages should help you get started!
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/PialEdits https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/WhiteMatterEdits
Jenni
On Wed, Jul 9, 2008 at 2:42 PM, nils rettby nils.rettby@gmail.com wrote:
There seems to be two problems with the recon. First the pia seems to be intruding into the white matter Then in the other hemisphere there seems to be a hole in the white matter Is there a way to fix this? Please see attached pictures Thanks for your help
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