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Installed freesurfer with the following errors.
banikr2@banikr:~/freesurfer$ source $FREESURFER_HOME/SetUpFreeSurfer.sh -------- freesurfer-linux-centos6_x86_64-7.1.1-20200723-8b40551 -------- Setting up environment for FreeSurfer/FS-FAST (and FSL) WARNING: /usr/local/freesurfer/fsfast does not exist FREESURFER_HOME /home/banikr2/freesurfer FSFAST_HOME /usr/local/freesurfer/fsfast FSF_OUTPUT_FORMAT nii.gz SUBJECTS_DIR /home/banikr2/freesurfer/subjects MNI_DIR /usr/local/freesurfer/mni WARNING: MINC_BIN_DIR '/usr/local/freesurfer/mni/bin' does not exist. WARNING: MINC_LIB_DIR '/usr/local/freesurfer/mni/lib' does not exist. FSL_DIR /usr/local/fsl
I can run freeview with the following:
banikr2@banikr:~/freesurfer$ freeview
Is the installation done correctly? Do the warnings compromise anything?
Rana Banik
freesurfer@nmr.mgh.harvard.edu