I copied some subjects' data to my computer, but i cannot run the surfer
here is the command line:
tksurfer MGH_Ruphert lh inflated
screen output
surfer: current subjects dir: /Users/lning/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /Users/lning/subjects/MGH_Ruphert surfer: ### Could not find anatomical header information
did you run recon-all on this subject?
On Fri, 3 Aug 2007, Ning Liu wrote:
I copied some subjects' data to my computer, but i cannot run the surfer
here is the command line:
tksurfer MGH_Ruphert lh inflated
screen output
surfer: current subjects dir: /Users/lning/subjects surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /Users/lning/subjects/MGH_Ruphert surfer: ### Could not find anatomical header information
Hi, I'm analyzing thickness in Freesurfer, and was interested in seeing if there were any hemispheric differences in my diagnosis effects. It occurred to me that I could use average values from the parcellations to test for diagnosis x hemisphere interactions, but was wondering if it was alternatively possible to calculate this on a node-by-node basis. Is there any recommended method for doing that?
Thanks,
-Aaron-
Hi Aaron,
we do have a beta of a vertex-by-vertex inter-hemispheric registration, but it's not released quite yet.
cheers, Bruce On Fri, 10 Aug 2007, Goldman, Aaron (NIH/NIMH) [C] wrote:
Hi, I'm analyzing thickness in Freesurfer, and was interested in seeing if there were any hemispheric differences in my diagnosis effects. It occurred to me that I could use average values from the parcellations to test for diagnosis x hemisphere interactions, but was wondering if it was alternatively possible to calculate this on a node-by-node basis. Is there any recommended method for doing that?
Thanks,
-Aaron-
freesurfer@nmr.mgh.harvard.edu
-
Bruce Fischl -
Goldman, Aaron (NIH/NIMH) [C] -
Ning Liu