a have a bunch of data stored in the subj_id directories of the subjects for convieniance but it is already in the average surface space, but i want to assemble it into one file so i can run the glm.
mris_preproc --fsgd subset.fsgd --target subset_average --hemi lh --meas winkler.mgh --out lh.surf.mgh
does not work obviously as the subjects # verticies does not agree ERROR: number of vertices in /study5/aa-scratch/UTAH/freesurfer_subjects/AD33112_2/surf/lh.winkler.mgh does not match surface (163842,149346) because it thinks the surf is on the subj_id surface.
how can i accomplish ?
cheers
greg
Hi Greg, you can do something like
mri_concat --o lh.surf.mgh $SUBJECTS_DIR/*/surf/winkler.mgh
doug
On 10/10/2012 04:52 PM, Gregory Kirk wrote:
a have a bunch of data stored in the subj_id directories of the subjects for convieniance but it is already in the average surface space, but i want to assemble it into one file so i can run the glm.
mris_preproc --fsgd subset.fsgd --target subset_average --hemi lh --meas winkler.mgh --out lh.surf.mgh
does not work obviously as the subjects # verticies does not agree ERROR: number of vertices in /study5/aa-scratch/UTAH/freesurfer_subjects/AD33112_2/surf/lh.winkler.mgh does not match surface (163842,149346) because it thinks the surf is on the subj_id surface.
how can i accomplish ?
cheers
greg _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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Douglas N Greve -
Gregory Kirk