Yes, in each analysis directory there is a meanfunc.nii.

Maybe this summer I will switch to FS5, but I have a bunch of experiments in 4.5 and am not 100% comfortable with the way the retinotopy analysis needs to be done in FS5, which is a vital component of my work.

Katie

On Thu, May 30, 2013 at 4:50 PM, Douglas N Greve greve@nmr.mgh.harvard.eduwrote:

Hi Katie, I don't remember what 4.5 outputs. Is there a "meanfunc" volume there? Itwould be much easier to support you if you were using version 5.x:) doug

On 05/30/2013 04:36 PM, Katie Bettencourt wrote:

...

Hi,

I have an experiment where I have 3 conditions in a FIR event related analysis (running FS 4.5). I need to get the mean activity level for each voxel across all conditions across the run, so that I can calculate percent signal change for each individual voxel. Is this available (I have analyzed each run separately) somewhere?

Katie

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