External Email - Use Caution
Hello FreeSurfer Developers,
I'm attempting to get some pictures about my results , so QDEC was used. However I can't adjust those pictures which QDEC produced, such as picture1.
When I read other's paper, they provided different pictures just like picture2. If there any other methods to produce statistic pictures of brain? Can you give me some advices?
Thank you for your help.
Best regards
Abby
External Email - Use Caution
Hello FreeSurfer Developers,
I'm attempting to get some pictures about my results , so QDEC was used. However I can't adjust those pictures which QDEC produced, such as picture1.
When I read other's paper, they provided different pictures just like picture2. If there any other methods to produce statistic pictures of brain? Can you give me some advices?
Thank you for your help.
Best regards
Abby
Hi Abby
have you tried using freeview? It is a lot more flexible than qdec and supports a bunch of different color maps cheers Bruce
On Wed, 5 Jun 2019, Abby tang wrote:
External Email - Use Caution
Hello FreeSurfer Developers,
I'm attempting to get some pictures about my results , so QDEC was used. However I can't adjust thos e pictures which QDEC produced, such as picture1.
When I read other's paper, they provided different pictures just like picture2. If there any other m ethods to produce statistic pictures of brain? Can you give me some advices?
Thank you for your help.
Best regards
Abby
External Email - Use Caution
*Hi Bruce* *I have tried freeview, but I don't know what file should be loaded in freeview. After qdec processing, what file format should be selected to load freeview?* *best wish* *Abby*
Bruce Fischl fischl@nmr.mgh.harvard.edu 于2019年6月5日周三 下午9:53写道：
Hi Abby
have you tried using freeview? It is a lot more flexible than qdec and supports a bunch of different color maps cheers Bruce
On Wed, 5 Jun 2019, Abby tang wrote:
External Email - Use CautionHello FreeSurfer Developers,
I'm attempting to get some pictures about my results , so QDEC was used.
However I can't adjust thos
e pictures which QDEC produced, such as picture1.
When I read other's paper, they provided different pictures just like
picture2. If there any other m
ethods to produce statistic pictures of brain? Can you give me some
advices?
Thank you for your help.
Best regards
Abby
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
*Hi Bruce* *I want to compare the relationship between age and thickness, which is controlled the effect about sex,education and eTIV. I want to get more beautiful pictures, but the ability of QDEC is limited.* *I have tried freeview, but I don't know what file should be loaded in freeview. After qdec processing, what file format should be selected to load freeview? Or if there are other method to use frreview direct to regressive age and thickness?* *Could you give me some advices?* *Thank you! Hope your reply.* *best wish * *Abby*
Abby tang abbytang0925@gmail.com 于2019年6月5日周三 下午10:32写道：
*Hi Bruce* *I have tried freeview, but I don't know what file should be loaded in freeview. After qdec processing, what file format should be selected to load freeview?* *best wish* *Abby*
Bruce Fischl fischl@nmr.mgh.harvard.edu 于2019年6月5日周三 下午9:53写道：
Hi Abby
have you tried using freeview? It is a lot more flexible than qdec and supports a bunch of different color maps cheers Bruce
On Wed, 5 Jun 2019, Abby tang wrote:
External Email - Use CautionHello FreeSurfer Developers,
I'm attempting to get some pictures about my results , so QDEC was
used. However I can't adjust thos
e pictures which QDEC produced, such as picture1.
When I read other's paper, they provided different pictures just like
picture2. If there any other m
ethods to produce statistic pictures of brain? Can you give me some
advices?
Thank you for your help.
Best regards
Abby
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Abby
HBM has slowed down our response time. If you don't gte an answer by next week can you repost?
cheers Bruce On Mon, 17 Jun 2019, Abby tang wrote:
External Email - Use Caution
Hi BruceI want to compare the relationship between age and thickness, which is controlled the effect about sex,education and eTIV. I want to get more beautiful pictures, but the ability of QDEC is limited. I have tried freeview, but I don't know what file should be loaded in freeview. After qdec processing, what file format should be selected to load freeview? Or if there are other method to use frreview direct to regressive age and thickness? Could you give me some advices? Thank you! Hope your reply. best wish Abby
Abby tang abbytang0925@gmail.com 于2019年6月5日周三 下午10:32写道： Hi BruceI have tried freeview, but I don't know what file should be loaded in freeview. After qdec processing, what file format should be selected to load freeview? best wish Abby
Bruce Fischl fischl@nmr.mgh.harvard.edu 于2019年6月5日周三 下午9:53写道： Hi Abby
have you tried using freeview? It is a lot more flexible than qdec and supports a bunch of different color maps cheers Bruce On Wed, 5 Jun 2019, Abby tang wrote: > > External Email - Use Caution > > Hello FreeSurfer Developers, > > I'm attempting to get some pictures about my results , so QDEC was used. However I can't adjust thos > e pictures which QDEC produced, such as picture1. > > When I read other's paper, they provided different pictures just like picture2. If there any other m > ethods to produce statistic pictures of brain? Can you give me some advices? > > Thank you for your help. > > Best regards > > Abby > >_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
You will have to find the qdec output folder. There will be a subfolder for each contrast. Load the sig.mgh file in the contrast subfolder, eg, tksurferfv fsaverage lh inflated -aparc -overalay sig.mgh tksurferfv is just a convenient front end for freeview (fv)
On 6/17/2019 1:56 PM, Abby tang wrote:
External Email - Use Caution
Hi Bruce I want to compare the relationship between age and thickness, which is controlled the effect about sex,education and eTIV. I want to get more beautiful pictures, but the ability of QDEC is limited. I have tried freeview, but I don't know what file should be loaded in freeview. After qdec processing, what file format should be selected to load freeview? Or if there are other method to use frreview direct to regressive age and thickness? Could you give me some advices? Thank you! Hope your reply. best wish Abby
Abby tang <abbytang0925@gmail.commailto:abbytang0925@gmail.com> 于2019年6月5日周三 下午10:32写道： Hi Bruce I have tried freeview, but I don't know what file should be loaded in freeview. After qdec processing, what file format should be selected to load freeview? best wish Abby
Bruce Fischl <fischl@nmr.mgh.harvard.edumailto:fischl@nmr.mgh.harvard.edu> 于2019年6月5日周三 下午9:53写道： Hi Abby
have you tried using freeview? It is a lot more flexible than qdec and supports a bunch of different color maps cheers Bruce
On Wed, 5 Jun 2019, Abby tang wrote:
External Email - Use CautionHello FreeSurfer Developers,
I'm attempting to get some pictures about my results , so QDEC was used. However I can't adjust thos e pictures which QDEC produced, such as picture1.
When I read other's paper, they provided different pictures just like picture2. If there any other m ethods to produce statistic pictures of brain? Can you give me some advices?
Thank you for your help.
Best regards
Abby
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Abby tang -
Bruce Fischl -
Greve, Douglas N.,Ph.D.