Hi:
How can I get the volume of the different lobes of the brain (occipital, parietal, temporal, etc) ?... White matter and gray matter?... Labels ?...
Sincerely,
Gonzalo Rojas Costa
You can run mri_annotation2label with --lobesStrict to get a lobe annotation. If that definition of "lobes" is good for you, then you can run mris_anatomical_stats to get the volume for each lobe. doug
Gonzalo Rojas Costa wrote:
Hi:
How can I get the volume of the different lobes of the brain (occipital, parietal, temporal, etc) ?... White matter and gray matter?... Labels ?...
Sincerely,
Gonzalo Rojas Costa _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Douglas:
The solution that you sent me runs only in freesurfer 5... Do you have ay solution for freesurfer 4.5.0 to compute GM+WM volume for each lobule ?...
Sincerely,
Gonzalo Rojas Costa
On Mon, Sep 26, 2011 at 11:01 AM, Douglas N Greve greve@nmr.mgh.harvard.edu wrote:
You can run mri_annotation2label with --lobesStrict to get a lobe annotation. If that definition of "lobes" is good for you, then you can run mris_anatomical_stats to get the volume for each lobe. doug
You can use mri_annotation2label to break the labels apart, then use mri_mergelabels to combine the individual labels into lobe labels, then use mris_label2annot to create a lobe annotation, then use mris_anatomical_stats.
doug
Gonzalo Rojas Costa wrote:
Hi Douglas:
The solution that you sent me runs only in freesurfer 5... Do you have ay solution for freesurfer 4.5.0 to compute GM+WM volume for each lobule ?...
Sincerely,
Gonzalo Rojas Costa
On Mon, Sep 26, 2011 at 11:01 AM, Douglas N Greve greve@nmr.mgh.harvard.edu wrote:
You can run mri_annotation2label with --lobesStrict to get a lobe annotation. If that definition of "lobes" is good for you, then you can run mris_anatomical_stats to get the volume for each lobe. doug
freesurfer@nmr.mgh.harvard.edu
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Douglas N Greve -
Gonzalo Rojas Costa