Re: [Freesurfer] volume of different lobes of the brain....

You can use mri_annotation2label to break the labels apart, then use mri_mergelabels to combine the individual labels into lobe labels, then use mris_label2annot to create a lobe annotation, then use mris_anatomical_stats.

doug

Gonzalo Rojas Costa wrote:

Hi Douglas:

The solution that you sent me runs only in freesurfer 5... Do you have ay solution for freesurfer 4.5.0 to compute GM+WM volume for each lobule ?...

Sincerely,

Gonzalo Rojas Costa

On Mon, Sep 26, 2011 at 11:01 AM, Douglas N Greve greve@nmr.mgh.harvard.edu wrote:

...

You can run mri_annotation2label with --lobesStrict to get a lobe annotation. If that definition of "lobes" is good for you, then you can run mris_anatomical_stats to get the volume for each lobe. doug