Hello Everyone!

I have run LGI analyses according to the JoVE article: https://www.jove.com/video/3417/how-to-measure-cortical-folding-from-mr-imag...

I created labels from the significant clusters and would like to extract the lgi values from these labels and found that past email chains suggested the following:

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• mris_anatomical_stats -l ?h_lgi_significant_cluster.label -t **SUBJ/surf/?h.pial_lgi -f ${subj}/stats/?h.aparc_lgi.stats **${subj}** ?h*>>>* aparcstats2table --subjects ALL_YOUR_SUBJECTS --hemi ?h --meas thickness** --parc aparc_lgi --tablefile aparc_lgi_?h.txt*

*However the output results in a stats table with the following headings:*

ColHeaders StructName NumVert SurfArea GrayVol ThickAvg ThickStd MeanCurv GausCurv FoldInd CurvInd

Thusly, I am not confident that any of these values represent the lgi value.

Can someone confirm that the correct value would appear under the thickness column in this case?

Thank you

Kate