Hello Freesurfer expert ,
I am sending you the image of brain.mgz screen-shot.
Is the area highlighted is part of cortex or it is due to skull stripping error.
Please clarify.
Thanks in advance,
cheers Saurabh Thakur,
Hi,
Can you send us a screenshot of the original MRI before skull stripping?
Thanks! Markus
On 20 mars 2014, at 14:46, Saurabh Thakur srbhthkr@gmail.com wrote:
Hello Freesurfer expert ,
I am sending you the image of brain.mgz screen-shot.
Is the area highlighted is part of cortex or it is due to skull stripping error.
Please clarify.
Thanks in advance,
cheers Saurabh Thakur,
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Hi Saurabh
those are eye sockets not brain. If the surfaces don't include them then don't worry about them.
cheers Bruce On Thu, 20 Mar 2014, Saurabh Thakur wrote:
Hello Freesurfer expert ,
I am sending you the image of brain.mgz screen-shot.
Is the area highlighted is part of cortex or it is due to skull stripping error.
Please clarify.
Thanks in advance,
cheers Saurabh Thakur,
freesurfer@nmr.mgh.harvard.edu