You have to tell it to do something, eg, add -all to the command line

On 7/13/2022 11:53 PM, Zixuan Lin wrote:

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Hello!

I am trying to run recon-all but it only converted the original image to .mgz and finished without error. I checked all other folders and it's empty. Attached please find the recon-all.log.

The command line I used is recon-all -i hc01.nii -s hc01 -sd /home/zlin/Documents/MDD_CVR/control

Could you please help me check what happens here?

Thanks a lot, Zixuan.

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