Hi,

recon-all takes an anatomical volume as input, not a functional one. You can give it any slice that is in the correct series (just specify one) and it will find the others.

cheers Bruce

On Tue, 6 Mar 2012, bowang21@mail.ustc.edu.cn wrote:

Dear all I just want to ask a sample question.What's the best number of the

parameter of 'recon-all' , -i invol1 -i invol2.That is, how many slices should we use?If the invol1 is the fist slice of the fMRI series or any one of the data?

                                    Yours

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