External Email - Use Caution

It seems that the dim in the header is -1 1 1 120. If I use Matlab command load_untouch_nii to read the file, the header shows dimension is 1 1 1 120 and will get a 1×1×1×120 img thank you Mingyang

Douglas N. Greve dgreve@mgh.harvard.edu 于 2021年5月27日周四 14:12写道：

Are you sure those are the dimensions? They do not look right. It should be something more like ~120000x1x1x120 Try running mri_info --dim fmcpr.up.sm5.self.lh.nii.gz

On 5/18/2021 1:26 PM, Mingyang Xia wrote:

    External Email - Use Caution

Dear freesurfer expert: I am sorry to disturb you. I have a question that when I use the command 'preproc-sess -s sess01 -fsd rest -stc up -surface self lhrh -mni305 -fwhm 0 -per-run -force', the dimension of output file of fmcpr.up.sm5.self.lh.nii.gz is 1*1*1*120. However, when I apply it to the fsaverage. It has correct dimensions. Could you tell me why it happens?

Thank you

Mingyang Xia

---

Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer https://secure-web.cisco.com/1__DYODslsZsUgArUxZP2OaCT3O-CRpWwuir_eoum2VQcWfBt8y8ZVYfiWUybeoFH7kA9ymD37kmSiFXAScjRF929gBGV0EZLKAwNrUCrAYhvYZ4kGdOQJy26Jhom76NST2n-6uyIXSx0p2MnTx_r6Mpd66rD216DV44ALHS9cWiG71AX8baOkmdBmfPmF6EK7LClqIG6k9gstXuTc0-8Ssyr4WyEIZk6A_fsslfgwkRvNJUF1qQbbdS99OBPAJ_upsO25pEqaJcWrmKokUQNPQ/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer__%3B%21%21LIr3w8kk_Xxm%216wpbEIBSsu4J-yhu76VqU8azwcYtYJHMUTCZoPvx5S1Pfoyc-Kh4fcQKFATs7l0u%24

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu

https://secure-web.cisco.com/1__DYODslsZsUgArUxZP2OaCT3O-CRpWwuir_eoum2VQcWf... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://secure-web.cisco.com/11eA5yO5nCrHu9m4zYtGYphPknmK_wErWetm5AQ6cluddmL... . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.