None region label number (color) not in FreeSurferColorLUT.txt - Freesurfer

18 Aug 2014


      I am trying to make a custom label color scheme and wanted to change the None. Region but the FreeSurferColorLUT.txt only lists the unknown region (0) rather than None.  I replaced the unknown region label name with None. to no avail like this.  Is the None. region a different label number and color code?
0  None.                           120 120 120   0
  1  bankssts                        120 120 120   0
  2  caudalanteriorcingulate         120 120 120   0
  3  caudalmiddlefrontal             120 120 120   0
  4  corpuscallosum                  120 120 120   0
  5  cuneus                          120 120 120   0
  6  entorhinal                      120 120 120   0
  7  fusiform                        120 120 120   0
  8  inferiorparietal                120 120 120   0
  9  inferiortemporal                120 120 120   0
10  isthmuscingulate                120 120 120   0
11  lateraloccipital                120 120 120   0
12  lateralorbitofrontal            120 120 120   0
13  lingual                         120 120 120   0
14  medialorbitofrontal             120 120 120   0
15  middletemporal                  120 120 120   0
16  parahippocampal                 120 120 120   0
17  paracentral                     120 120 120   0
18  parsopercularis                 120 120 120   0
19  parsorbitalis                   120 120 120   0
20  parstriangularis                120 120 120   0
21  pericalcarine                   255 0   0     0
22  postcentral                     120 120 120   0
23  posteriorcingulate              120 120 120   0
24  precentral                      255 192 203   0
25  precuneus                       120 120 120   0
26  rostralanteriorcingulate        120 120 120   0
27  rostralmiddlefrontal            255 99 71    0
28  superiorfrontal                 120 120 120   0
29  superiorparietal                240 128 128   0
30  superiortemporal                120 120 120   0
31  supramarginal                   120 120 120   0
32  frontalpole                     120 120 120   0
33  temporalpole                    120 120 120   0
34  transversetemporal              255 69   0    0
35  insula                          120 120 120   0
Eric Axelson
Research Specialist
Department of Psychiatry
Iowa Neuroimaging Consortiumhttp://www.medicine.uiowa.edu/iowaneuroimagingconsortium/
University of Iowa
319-384-9206
eric-axelson@uiowa.edumailto:eric-axelson@uiowa.edu
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