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Hello,
I have had success projecting regions such as the entorhinal region to an inflated 3D model. But I can't seem to do the same for hippocampi. I wouldn't need any hippocampal subfields, just projecting the hippocampus as a whole would be useful. Is there perhaps a particular file used for this that I am missing?
Any help is appreciated, Mohammad Rashid
Hi Mohammad
you can use mri_tessellate or mri_mc to build a mesh model of the hippocampus from the aseg if you want, then use mris_inflate on it. You will lose internal structure though.
cheers Bruce On Sun, 19 Jan 2020, Mohammad Rashid wrote:
External Email - Use Caution
Hello,
I have had success projecting regions such as the entorhinal region to an inflated 3D model. But I can't seem to do the same for hippocampi. I wouldn't need any hippocampal subfields, just projecting the hippocampus as a whole would be useful. Is there perhaps a particular file used for this that I am missing?
Any help is appreciated, Mohammad Rashid
freesurfer@nmr.mgh.harvard.edu