Dear All,
I am new to freesurfer. I am wondering is it possible to save the fsgd created automatically by qdec.
Thanks venkat
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It will be in the glmfit output dir (as y.fsgd).
doug
Rajagopalan, Venkateswaran wrote:
Dear All,
I am new to freesurfer. I am wondering is it possible to save the fsgd created automatically by qdec.
Thanks venkat
===================================
P Please consider the environment before printing this e-mail
Cleveland Clinic is ranked one of the top hospitals in America by U.S.News & World Report (2009). Visit us online at http://www.clevelandclinic.org for a complete listing of our services, staff and locations.
Confidentiality Note: This message is intended for use only by the individual or entity to which it is addressed and may contain information that is privileged, confidential, and exempt from disclosure under applicable law. If the reader of this message is not the intended recipient or the employee or agent responsible for delivering the message to the intended recipient, you are hereby notified that any dissemination, distribution or copying of this communication is strictly prohibited. If you have received this communication in error, please contact the sender immediately and destroy the material in its entirety, whether electronic or hard copy. Thank you.
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Hi All, I was wondering if there is a command to extract connected components from a thresholded surface contrast map. I am trying to implement a cluster-size based permutation test on our MEG data.
Thanks and Regards, Hari
Hi Hari,
there is some internal code for doing this, but I don't think there is any externally accessible interface for it. You are welcome to the code if you want to adapt it...
cheers, Bruce On Wed, 5 May 2010, Hari Bharadwaj wrote:
Hi All, I was wondering if there is a command to extract connected components from a thresholded surface contrast map. I am trying to implement a cluster-size based permutation test on our MEG data.
Thanks and Regards, Hari
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
mri_surfcluster will do. BTW, cluster-based permutation is already build into our tools (mri_glmfit and mri_glmfit-sim).
doug
Hari Bharadwaj wrote:
Hi All, I was wondering if there is a command to extract connected components from a thresholded surface contrast map. I am trying to implement a cluster-size based permutation test on our MEG data.
Thanks and Regards, Hari
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Bruce Fischl -
Douglas N Greve -
Hari Bharadwaj -
Rajagopalan, Venkateswaran