Hello FreeSufers,
I ran several analyses in qdec, and now have problem visualize previous analyses results...which sounds dumb... Please let me know if you have any ideas.
I used fsaverage. I found this page http://freesurfer.net/fswiki/FsTutorial/Visualization using tksurfer, but it needs to do the "make_average". And it mentioned some "pre-computed results", I thought which would be the results of analyses via command line. Does this apply to the results by qdec?
I also found the following command using Freeview: freeview -f SUBJECTS_DIR/fsaverage/surf/lh.inflated:annot=aparc.annot:annot_outline=1:overlay=lh.gender_age.glmdir/lh-Avg-thickness-age-Cor/sig.mgh:overlay_threshold=4,5 -viewport 3d
But I don't know which part of the command should I change. I tried the command as it is above anyway and the error is: Unrecognized sub-option flag 'annot_outline'
Many thanks! All the best, Qijing
I also have this problem now. did this query ever resolve?
On Wed, Jun 4, 2014 at 10:55 PM, Qijing Yu yu.qijing.psy@gmail.com wrote:
Hello FreeSufers,
I ran several analyses in qdec, and now have problem visualize previous analyses results...which sounds dumb... Please let me know if you have any ideas.
I used fsaverage. I found this page http://freesurfer.net/fswiki/FsTutorial/Visualization using tksurfer, but it needs to do the "make_average". And it mentioned some "pre-computed results", I thought which would be the results of analyses via command line. Does this apply to the results by qdec?
I also found the following command using Freeview: freeview -f SUBJECTS_DIR/fsaverage/surf/lh.inflated:annot=aparc.annot:annot_outline=1:overlay=lh.gender_age.glmdir/lh-Avg-thickness-age-Cor/sig.mgh:overlay_threshold=4,5 -viewport 3d
But I don't know which part of the command should I change. I tried the command as it is above anyway and the error is: Unrecognized sub-option flag 'annot_outline'
Many thanks! All the best, Qijing
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu