Are you asking if that  is a topological defect? It is impossible to say from one slice. The surface itself is ok to be there as that is on the medial well.

On 8/30/2021 8:53 PM, halil ibrahim AKÇAY wrote:

External Email - Use Caution

Hi My name is Halil Ibrahim akçay. I am a neurologist.

I have been used FreeSurfer for a while. And I cannot understand some part of troubleshooting process. I am sending a screenshot of my question. How can I understand whether gray zone as marked blue circle is a problem or not in this picture? And Should I fill this zone to fix the problem, if this is a problem?

Thanx for your helping.

I am looking forward to your answer.

Best regards

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer