Hi Doug et al,
I'm trying to import the polar and eccentricity maps resulting from a retinotopy analysis into Matlab for some additional manipulation. Specifically, what I'd like is to get something like the output from:
surf-sess -s sessid -a rtopy -retinotopy polar/eccen -flat
as polar and eccentricity values that I can use to compare to activation from another task (i.e. what are the polar visual field coordinates for all surface locations with significant activation in the other task). The surf-sess command above works and the rest of the field sign analysis looks good, so I think the analysis all went fine, but I'm not sure which files contain the data I'm looking for (seems like map-real/imag-?h.w, but if so, I'm not clear on how to combine the real and imaginary parts).
Thanks! Finn
Does the data has to be isotropic to process it with freesrufer for cortical measurements? I have MPRAGES with resolution 1x1x1.5 which I want to run through recon-all.
Ayaz
that should be ok, but of course somewhat less accurate Bruce On Thu, 2 Sep 2010, Muhammad Ayaz wrote:
Does the data has to be isotropic to process it with freesrufer for cortical measurements? I have MPRAGES with resolution 1x1x1.5 which I want to run through recon-all.
Ayaz
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