Hello FS experts,I am reposting as a good few emails went by after me posting. My question is below.Thank you for your help.Pablo

From: pablonajt@hotmail.com To: freesurfer@nmr.mgh.harvard.edu Date: Tue, 6 Oct 2015 13:53:21 +0000 Subject: [Freesurfer] repeated measures ANOVA using the FSGD file

Dear FS expertsTrying to set up a Linear Mixed Effects, which I understand would basically be a repeated measures design. My design has 3 groups (HC, PT relatives and PT).Instead of time points of the same subject my design matrix uses each family member within a family. So I will have many subjects within family_1, same for family_2 and so on... I also want to include gender as a covariate. In short my question is:For my design in repeated measures do I need to define all my groups for each discrete variable as how we do it for glm?For example if I want to have variables GROUP + GENDER + FAMILY.Should i do it as follows?class HC_Female_Family1class PT_Female_Family1class HC_Male_Family2class HC_Female_Family2...... Many thanks,Pablo

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